In The Book Lisbeth Salander has "a pierced nose and eyebrows"
In the movies the collection is expendid a bit:
Noomi Rapace added the Septum and the mutipel earrings
Noomi Rapace
in her right ear and 1 on the left
Rooney Mara added a lipring
Rooney Mara, as Lisbeth Salander, on the cover of W Magazine
and a nipple piercing and changed the earring placement